- Functional genomic studies of tick cells in response to infection with the cattle pathogen, Anaplasma marginale
Protein Lounge database used to determine protein ontology.
- Towards Powerful Old Age: Association between Hormonal Replacement Therapy and Skeletal Muscle
Pathway Builder used to make diagram of AKT-related pathways leading to atrophy or hypertrophy of muscle fibers (Fig 3).
- The phosphoinositide 3-kinase pathway and cancer
David Stokoe. Expert Rev in Mol Med 7: 1-22
- Mining large heterogeneous data sets in drug discovery
Mentions ProteinLounge disease database as a means of getting disease level information.
- Proteins secreted by embryonic stem cells activate cardiomyocytes through ligand binding pathways
Crossed data obtained from Significance Arrays of Microanalysis Software with ProteinLounge pathway database.
- Using high-throughput genomics to study hepatitis C: What determines the outcome of infection?
Used Pathway Builder to help diagram IFN-signaling pathways in mice (Fig 4).
- Oligonucleotides as Anticancer Agents: From the Benchside to the Clinic and Beyond
ProteinLounge mentioned as having a database of siRNAs that are effective in several species.
- Evidence of the role of tick subolesin in gene expression
Protein Lounge database used to determine protein ontology.
- Protein tyrosine phosphatase interacting protein 51-a jack-of-all-trades protein
Pathway Builder used to draw a MAPK/PKC pathway (Fig 7).
- Selective Raf inhibition in cancer therapy
ProteinLounge mentioned as an expert system focused on pathway analysis.
- INTEGRATIVE SYSTEM BIOLOGY STUDIES ON HIGH THROUGHPUT
GENOMICS AND PROTEOMICS DATASET
Madhankumar Sonachalam. Thesis. Protein Lounge Pathway Database mentioned as a source for Human Pathway Database
- NF-kappaB in Aging and Disease
Protein Lounge pathways adapted for IKK pathway (Fig 2).